Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 TSPY15P-201ENST00000457163 923 ntBASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 PRSS44-201ENST00000515154 1146 ntBASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 AC079598.2-202ENST00000546624 1451 ntBASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM248Q9NWD8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 AC096733.2-201ENST00000609937 1394 ntBASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM248Q9NWD8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TMEM248Q9NWD8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM248Q9NWD8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM248Q9NWD8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM248Q9NWD8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM248Q9NWD8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 AC097488.1-201ENST00000507834 756 ntBASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 AP005242.2-201ENST00000580065 1175 ntBASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 AP000525.1-201ENST00000608286 694 ntBASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM248Q9NWD8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM248Q9NWD8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms