Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 AC140113.3-201ENST00000605663 199 ntBASIC22.72■■□□□ 1.23
DDX4Q9NQI0 AC091076.1-201ENST00000610741 619 ntBASIC22.72■■□□□ 1.23
DDX4Q9NQI0 AL031432.5-201ENST00000641059 760 ntBASIC22.72■■□□□ 1.23
DDX4Q9NQI0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
DDX4Q9NQI0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 HOMER2P1-201ENST00000455653 964 ntBASIC22.71■■□□□ 1.23
DDX4Q9NQI0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX4Q9NQI0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
DDX4Q9NQI0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
DDX4Q9NQI0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.7■■□□□ 1.23
DDX4Q9NQI0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX4Q9NQI0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.69■■□□□ 1.22
DDX4Q9NQI0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX4Q9NQI0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms