Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 AL512408.1-201ENST00000569378 2000 ntBASIC19.87■□□□□ 0.77
HPS4Q9NQG7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 LINC01238-205ENST00000567549 1107 ntBASIC19.87■□□□□ 0.77
HPS4Q9NQG7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 AC141257.4-201ENST00000634557 245 ntBASIC19.87■□□□□ 0.77
HPS4Q9NQG7 AC136944.6-201ENST00000634818 245 ntBASIC19.87■□□□□ 0.77
HPS4Q9NQG7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
HPS4Q9NQG7 AIRN-201ENST00000601203 4374 ntBASIC19.87■□□□□ 0.77
HPS4Q9NQG7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 AL691432.2-201ENST00000607222 2038 ntBASIC19.86■□□□□ 0.77
HPS4Q9NQG7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 COX11P1-201ENST00000489116 835 ntBASIC19.86■□□□□ 0.77
HPS4Q9NQG7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HPS4Q9NQG7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 AL031133.1-201ENST00000406807 723 ntBASIC19.85■□□□□ 0.77
HPS4Q9NQG7 TSPY5P-201ENST00000426936 936 ntBASIC19.85■□□□□ 0.77
HPS4Q9NQG7 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.85■□□□□ 0.77
HPS4Q9NQG7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.85■□□□□ 0.77
HPS4Q9NQG7 CKBP1-201ENST00000565489 1086 ntBASIC19.85■□□□□ 0.77
HPS4Q9NQG7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 AL358472.4-201ENST00000633140 710 ntBASIC19.85■□□□□ 0.77
HPS4Q9NQG7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
HPS4Q9NQG7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 CA15P1-201ENST00000481698 905 ntBASIC19.84■□□□□ 0.77
HPS4Q9NQG7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.84■□□□□ 0.77
HPS4Q9NQG7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms