Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.48■■□□□ 1.03
CBX8Q9HC52 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBX8Q9HC52 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CBX8Q9HC52 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CBX8Q9HC52 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.47■■□□□ 1.03
CBX8Q9HC52 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.47■■□□□ 1.03
CBX8Q9HC52 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.47■■□□□ 1.03
CBX8Q9HC52 AC034268.1-201ENST00000441047 882 ntBASIC21.47■■□□□ 1.03
CBX8Q9HC52 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.47■■□□□ 1.03
CBX8Q9HC52 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.47■■□□□ 1.03
CBX8Q9HC52 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CBX8Q9HC52 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBX8Q9HC52 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CBX8Q9HC52 ANO7L1-203ENST00000602586 1720 ntBASIC21.46■■□□□ 1.03
CBX8Q9HC52 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CBX8Q9HC52 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CBX8Q9HC52 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.46■■□□□ 1.03
CBX8Q9HC52 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.46■■□□□ 1.03
CBX8Q9HC52 AC093787.1-201ENST00000450396 207 ntBASIC21.46■■□□□ 1.03
CBX8Q9HC52 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.46■■□□□ 1.03
CBX8Q9HC52 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.46■■□□□ 1.03
CBX8Q9HC52 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CBX8Q9HC52 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CBX8Q9HC52 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CBX8Q9HC52 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.45■■□□□ 1.03
CBX8Q9HC52 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.03
CBX8Q9HC52 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 AP000997.3-201ENST00000623333 2250 ntBASIC21.45■■□□□ 1.02
CBX8Q9HC52 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 OR10C1-204ENST00000622521 1039 ntBASIC21.45■■□□□ 1.02
CBX8Q9HC52 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CBX8Q9HC52 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CBX8Q9HC52 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CBX8Q9HC52 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CBX8Q9HC52 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CBX8Q9HC52 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CBX8Q9HC52 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CBX8Q9HC52 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CBX8Q9HC52 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CBX8Q9HC52 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms