Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM1Q9HBL6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.48■□□□□ 0.55
LRTM1Q9HBL6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 AC142086.2-201ENST00000569753 217 ntBASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 AC104771.1-201ENST00000603335 964 ntBASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 AC020763.4-201ENST00000623414 4170 ntBASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM1Q9HBL6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 IRX1P1-201ENST00000438849 1838 ntBASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 FP475955.4-201ENST00000623131 1990 ntBASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 UNC93B4-201ENST00000505679 747 ntBASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRTM1Q9HBL6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms