Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 C1QL1P1-201ENST00000568105 661 ntBASIC17.13■□□□□ 0.33
NELFAQ9H3P2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 ZNF815P-204ENST00000434898 1737 ntBASIC17.13■□□□□ 0.33
NELFAQ9H3P2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NELFAQ9H3P2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 RARRES2P10-201ENST00000564312 460 ntBASIC17.12■□□□□ 0.33
NELFAQ9H3P2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFAQ9H3P2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 AL032819.2-201ENST00000624543 2162 ntBASIC17.11■□□□□ 0.33
NELFAQ9H3P2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 AC066615.1-201ENST00000640911 628 ntBASIC17.11■□□□□ 0.33
NELFAQ9H3P2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 HTR7P1-201ENST00000538670 1336 ntBASIC17.11■□□□□ 0.33
NELFAQ9H3P2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NELFAQ9H3P2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.1■□□□□ 0.33
NELFAQ9H3P2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NELFAQ9H3P2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms