Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 RPS2P55-201ENST00000397318 883 ntBASIC20.3■□□□□ 0.84
LHX5Q9H2C1 AC107956.1-201ENST00000494359 873 ntBASIC20.3■□□□□ 0.84
LHX5Q9H2C1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 AL031985.4-201ENST00000642138 673 ntBASIC20.3■□□□□ 0.84
LHX5Q9H2C1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX5Q9H2C1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 AC018445.3-201ENST00000624177 1945 ntBASIC20.29■□□□□ 0.84
LHX5Q9H2C1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 FP475955.4-201ENST00000623131 1990 ntBASIC20.29■□□□□ 0.84
LHX5Q9H2C1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 AC233702.5-201ENST00000584107 538 ntBASIC20.29■□□□□ 0.84
LHX5Q9H2C1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 FEM1AP3-201ENST00000403722 1741 ntBASIC20.29■□□□□ 0.84
LHX5Q9H2C1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 AL161938.1-201ENST00000569833 2180 ntBASIC20.29■□□□□ 0.84
LHX5Q9H2C1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.29■□□□□ 0.84
LHX5Q9H2C1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 IRX1P1-201ENST00000438849 1838 ntBASIC20.28■□□□□ 0.84
LHX5Q9H2C1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 TSPY23P-201ENST00000440136 739 ntBASIC20.28■□□□□ 0.84
LHX5Q9H2C1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX5Q9H2C1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 RCC2P6-201ENST00000526625 1557 ntBASIC20.27■□□□□ 0.84
LHX5Q9H2C1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 AP001412.1-201ENST00000608405 714 ntBASIC20.27■□□□□ 0.84
LHX5Q9H2C1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX5Q9H2C1 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.27■□□□□ 0.84
LHX5Q9H2C1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
LHX5Q9H2C1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LHX5Q9H2C1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
LHX5Q9H2C1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.27■□□□□ 0.83
LHX5Q9H2C1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.27■□□□□ 0.83
LHX5Q9H2C1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.27■□□□□ 0.83
LHX5Q9H2C1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LHX5Q9H2C1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LHX5Q9H2C1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LHX5Q9H2C1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms