Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS11Q9H270 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS11Q9H270 AC090164.3-201ENST00000610780 2143 ntBASIC19.34■□□□□ 0.69
VPS11Q9H270 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.34■□□□□ 0.69
VPS11Q9H270 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS11Q9H270 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.33■□□□□ 0.69
VPS11Q9H270 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.33■□□□□ 0.69
VPS11Q9H270 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.33■□□□□ 0.69
VPS11Q9H270 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS11Q9H270 AC090340.1-201ENST00000620778 4980 ntBASIC19.33■□□□□ 0.69
VPS11Q9H270 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
VPS11Q9H270 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
VPS11Q9H270 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VPS11Q9H270 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
VPS11Q9H270 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS11Q9H270 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
VPS11Q9H270 AC093525.10-201ENST00000625130 1569 ntBASIC19.33■□□□□ 0.69
VPS11Q9H270 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VPS11Q9H270 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS11Q9H270 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.33■□□□□ 0.68
VPS11Q9H270 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.33■□□□□ 0.68
VPS11Q9H270 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VPS11Q9H270 AL050303.2-201ENST00000619798 666 ntBASIC19.33■□□□□ 0.68
VPS11Q9H270 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.33■□□□□ 0.68
VPS11Q9H270 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.33■□□□□ 0.68
VPS11Q9H270 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS11Q9H270 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS11Q9H270 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS11Q9H270 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
VPS11Q9H270 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VPS11Q9H270 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS11Q9H270 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VPS11Q9H270 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
VPS11Q9H270 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.32■□□□□ 0.68
VPS11Q9H270 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS11Q9H270 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS11Q9H270 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS11Q9H270 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS11Q9H270 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS11Q9H270 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.32■□□□□ 0.68
VPS11Q9H270 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS11Q9H270 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.32■□□□□ 0.68
VPS11Q9H270 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.32■□□□□ 0.68
VPS11Q9H270 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.32■□□□□ 0.68
VPS11Q9H270 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
VPS11Q9H270 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
VPS11Q9H270 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS11Q9H270 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS11Q9H270 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
VPS11Q9H270 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
VPS11Q9H270 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.32■□□□□ 0.68
VPS11Q9H270 Z98044.1-201ENST00000632503 1764 ntBASIC19.32■□□□□ 0.68
VPS11Q9H270 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.31■□□□□ 0.68
VPS11Q9H270 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.31■□□□□ 0.68
VPS11Q9H270 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
VPS11Q9H270 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
VPS11Q9H270 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.31■□□□□ 0.68
VPS11Q9H270 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.31■□□□□ 0.68
VPS11Q9H270 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
VPS11Q9H270 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.31■□□□□ 0.68
VPS11Q9H270 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 ZNF815P-204ENST00000434898 1737 ntBASIC19.31■□□□□ 0.68
VPS11Q9H270 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS11Q9H270 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.31■□□□□ 0.68
VPS11Q9H270 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS11Q9H270 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
VPS11Q9H270 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VPS11Q9H270 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VPS11Q9H270 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS11Q9H270 WIZP1-201ENST00000531444 2299 ntBASIC19.3■□□□□ 0.68
VPS11Q9H270 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.3■□□□□ 0.68
VPS11Q9H270 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
VPS11Q9H270 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
VPS11Q9H270 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.3■□□□□ 0.68
VPS11Q9H270 AC005829.2-201ENST00000571422 1056 ntBASIC19.3■□□□□ 0.68
VPS11Q9H270 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms