Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 AC144831.1-201ENST00000573312 2656 ntBASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 AC108673.1-201ENST00000510422 1159 ntBASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 AL512353.2-201ENST00000448759 1962 ntBASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC11.19□□□□□ -0.62
CYSTM1Q9H1C7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 AC024909.3-201ENST00000611513 2257 ntBASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CYSTM1Q9H1C7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
CYSTM1Q9H1C7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms