Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 AL590326.2-201ENST00000625139 305 ntBASIC19.94■□□□□ 0.78
RNF38Q9H0F5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF38Q9H0F5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF38Q9H0F5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 ARMC10P1-201ENST00000313754 855 ntBASIC19.92■□□□□ 0.78
RNF38Q9H0F5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 PRSS44-201ENST00000515154 1146 ntBASIC19.92■□□□□ 0.78
RNF38Q9H0F5 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF38Q9H0F5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 TREX1-205ENST00000625293 1783 ntBASIC19.91■□□□□ 0.78
RNF38Q9H0F5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 BX664615.1-201ENST00000443558 458 ntBASIC19.91■□□□□ 0.78
RNF38Q9H0F5 AP003041.3-201ENST00000527151 707 ntBASIC19.91■□□□□ 0.78
RNF38Q9H0F5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF38Q9H0F5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms