Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 AC092364.2-202ENST00000597012 1073 ntBASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 AC138894.3-201ENST00000603787 634 ntBASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 AL773604.1-201ENST00000617417 272 ntBASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3Q9BZ76 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 AC112497.1-201ENST00000624824 639 ntBASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 AC083906.6-201ENST00000641366 219 ntBASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 AC079781.4-201ENST00000641908 219 ntBASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.32■□□□□ 0.52
CNTNAP3Q9BZ76 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 UPF3AP3-201ENST00000420996 769 ntBASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 CA15P1-201ENST00000481698 905 ntBASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3Q9BZ76 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 AC010327.4-202ENST00000591484 748 ntBASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3Q9BZ76 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 AC026471.6-201ENST00000622954 1905 ntBASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 AKR1C7P-201ENST00000305623 895 ntBASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNTNAP3Q9BZ76 FAM8A3P-201ENST00000427218 844 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms