Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1CQ9BQE3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.13■□□□□ 0.49
TUBA1CQ9BQE3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TUBA1CQ9BQE3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.13■□□□□ 0.49
TUBA1CQ9BQE3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1CQ9BQE3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.13■□□□□ 0.49
TUBA1CQ9BQE3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1CQ9BQE3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.13■□□□□ 0.49
TUBA1CQ9BQE3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TUBA1CQ9BQE3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TUBA1CQ9BQE3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 KRT17P3-201ENST00000420566 1262 ntBASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 GCSHP5-201ENST00000443090 522 ntBASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 RPS2P52-201ENST00000469610 820 ntBASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 AC005829.2-201ENST00000571422 1056 ntBASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 AC104581.1-202ENST00000635932 2618 ntBASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TUBA1CQ9BQE3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 AL158047.1-201ENST00000445918 881 ntBASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 AC142381.4-202ENST00000563973 229 ntBASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 AC006557.6-201ENST00000623071 864 ntBASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
TUBA1CQ9BQE3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms