Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
ARID3AQ99856 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3AQ99856 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3AQ99856 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ARID3AQ99856 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ARID3AQ99856 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.76■■□□□ 1.07
ARID3AQ99856 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3AQ99856 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.75■■□□□ 1.07
ARID3AQ99856 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.75■■□□□ 1.07
ARID3AQ99856 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3AQ99856 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3AQ99856 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3AQ99856 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3AQ99856 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3AQ99856 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ARID3AQ99856 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3AQ99856 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3AQ99856 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.75■■□□□ 1.07
ARID3AQ99856 GPX1P1-201ENST00000388829 606 ntBASIC21.75■■□□□ 1.07
ARID3AQ99856 BX276092.2-201ENST00000417668 665 ntBASIC21.75■■□□□ 1.07
ARID3AQ99856 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.75■■□□□ 1.07
ARID3AQ99856 PGM5P4-201ENST00000421970 445 ntBASIC21.75■■□□□ 1.07
ARID3AQ99856 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.75■■□□□ 1.07
ARID3AQ99856 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.75■■□□□ 1.07
ARID3AQ99856 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ARID3AQ99856 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.75■■□□□ 1.07
ARID3AQ99856 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ARID3AQ99856 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ARID3AQ99856 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
ARID3AQ99856 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.75■■□□□ 1.07
ARID3AQ99856 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ARID3AQ99856 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ARID3AQ99856 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARID3AQ99856 TCF3P1-201ENST00000423021 1937 ntBASIC21.74■■□□□ 1.07
ARID3AQ99856 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.74■■□□□ 1.07
ARID3AQ99856 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARID3AQ99856 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.74■■□□□ 1.07
ARID3AQ99856 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARID3AQ99856 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.74■■□□□ 1.07
ARID3AQ99856 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARID3AQ99856 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
ARID3AQ99856 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ARID3AQ99856 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARID3AQ99856 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.74■■□□□ 1.07
ARID3AQ99856 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.74■■□□□ 1.07
ARID3AQ99856 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARID3AQ99856 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARID3AQ99856 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARID3AQ99856 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARID3AQ99856 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ARID3AQ99856 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.74■■□□□ 1.07
ARID3AQ99856 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARID3AQ99856 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ARID3AQ99856 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
ARID3AQ99856 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ARID3AQ99856 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARID3AQ99856 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.73■■□□□ 1.07
ARID3AQ99856 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.73■■□□□ 1.07
ARID3AQ99856 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.73■■□□□ 1.07
ARID3AQ99856 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARID3AQ99856 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.73■■□□□ 1.07
ARID3AQ99856 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARID3AQ99856 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ARID3AQ99856 MIPEPP3-201ENST00000412105 444 ntBASIC21.73■■□□□ 1.07
ARID3AQ99856 HLA-L-209ENST00000420110 1011 ntBASIC21.73■■□□□ 1.07
ARID3AQ99856 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ARID3AQ99856 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARID3AQ99856 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARID3AQ99856 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ARID3AQ99856 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.73■■□□□ 1.07
ARID3AQ99856 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
ARID3AQ99856 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ARID3AQ99856 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ARID3AQ99856 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.72■■□□□ 1.07
ARID3AQ99856 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ARID3AQ99856 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.72■■□□□ 1.07
ARID3AQ99856 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ARID3AQ99856 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.72■■□□□ 1.07
ARID3AQ99856 AC098934.4-201ENST00000564127 592 ntBASIC21.72■■□□□ 1.07
ARID3AQ99856 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.72■■□□□ 1.07
ARID3AQ99856 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.72■■□□□ 1.07
ARID3AQ99856 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.72■■□□□ 1.07
ARID3AQ99856 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
ARID3AQ99856 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ARID3AQ99856 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARID3AQ99856 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
ARID3AQ99856 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms