Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 AC004264.1-201ENST00000608354 794 ntBASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUDCD1Q96RS6 AC125437.2-201ENST00000625180 2167 ntBASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 FAM197Y4-202ENST00000622692 608 ntBASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 AC005082.1-201ENST00000413042 2259 ntBASIC19.85■□□□□ 0.77
NUDCD1Q96RS6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 AL158047.1-201ENST00000445918 881 ntBASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 KRT16P5-201ENST00000455284 522 ntBASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 HCG11-201ENST00000411553 5696 ntBASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NUDCD1Q96RS6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 TUBB8P6-201ENST00000436895 1288 ntBASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.83■□□□□ 0.77
NUDCD1Q96RS6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NUDCD1Q96RS6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NUDCD1Q96RS6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms