Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.89■□□□□ 0.61
CFAP54Q96N23 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.89■□□□□ 0.61
CFAP54Q96N23 FAM8A3P-201ENST00000427218 844 ntBASIC18.89■□□□□ 0.61
CFAP54Q96N23 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.89■□□□□ 0.61
CFAP54Q96N23 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.89■□□□□ 0.61
CFAP54Q96N23 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CFAP54Q96N23 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.88■□□□□ 0.61
CFAP54Q96N23 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.88■□□□□ 0.61
CFAP54Q96N23 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CFAP54Q96N23 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.88■□□□□ 0.61
CFAP54Q96N23 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CFAP54Q96N23 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CFAP54Q96N23 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CFAP54Q96N23 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CFAP54Q96N23 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.88■□□□□ 0.61
CFAP54Q96N23 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.88■□□□□ 0.61
CFAP54Q96N23 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CFAP54Q96N23 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CFAP54Q96N23 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.87■□□□□ 0.61
CFAP54Q96N23 TOB2P1-201ENST00000469761 992 ntBASIC18.87■□□□□ 0.61
CFAP54Q96N23 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.87■□□□□ 0.61
CFAP54Q96N23 PLK5-205ENST00000642079 1969 ntBASIC18.87■□□□□ 0.61
CFAP54Q96N23 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.87■□□□□ 0.61
CFAP54Q96N23 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.87■□□□□ 0.61
CFAP54Q96N23 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.87■□□□□ 0.61
CFAP54Q96N23 AL117328.2-201ENST00000624617 1940 ntBASIC18.87■□□□□ 0.61
CFAP54Q96N23 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 RPSAP43-201ENST00000402237 625 ntBASIC18.87■□□□□ 0.61
CFAP54Q96N23 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.87■□□□□ 0.61
CFAP54Q96N23 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CFAP54Q96N23 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.87■□□□□ 0.61
CFAP54Q96N23 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.87■□□□□ 0.61
CFAP54Q96N23 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CFAP54Q96N23 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.86■□□□□ 0.61
CFAP54Q96N23 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.86■□□□□ 0.61
CFAP54Q96N23 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.86■□□□□ 0.61
CFAP54Q96N23 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.86■□□□□ 0.61
CFAP54Q96N23 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.86■□□□□ 0.61
CFAP54Q96N23 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CFAP54Q96N23 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.86■□□□□ 0.61
CFAP54Q96N23 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.86■□□□□ 0.61
CFAP54Q96N23 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CFAP54Q96N23 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CFAP54Q96N23 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CFAP54Q96N23 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.85■□□□□ 0.61
CFAP54Q96N23 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CFAP54Q96N23 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CFAP54Q96N23 Z98882.1-201ENST00000622160 2253 ntBASIC18.85■□□□□ 0.61
CFAP54Q96N23 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CFAP54Q96N23 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
CFAP54Q96N23 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CFAP54Q96N23 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.85■□□□□ 0.61
CFAP54Q96N23 KRT18P67-201ENST00000432816 1264 ntBASIC18.85■□□□□ 0.61
CFAP54Q96N23 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
CFAP54Q96N23 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CFAP54Q96N23 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.85■□□□□ 0.61
CFAP54Q96N23 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CFAP54Q96N23 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CFAP54Q96N23 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.85■□□□□ 0.61
CFAP54Q96N23 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.85■□□□□ 0.61
CFAP54Q96N23 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.84■□□□□ 0.61
CFAP54Q96N23 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CFAP54Q96N23 AKR1C7P-201ENST00000305623 895 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms