Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 WWOX-216ENST00000569818 525 ntBASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 AC116562.4-202ENST00000641738 218 ntBASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 TREX1-205ENST00000625293 1783 ntBASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6V0A1Q93050 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 CCR12P-201ENST00000446203 998 ntBASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 AC087388.1-201ENST00000571370 1112 ntBASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6V0A1Q93050 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.52■■□□□ 1.03
ATP6V0A1Q93050 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ATP6V0A1Q93050 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP6V0A1Q93050 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ATP6V0A1Q93050 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP6V0A1Q93050 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ATP6V0A1Q93050 AC125437.2-201ENST00000625180 2167 ntBASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 HMGA1P5-201ENST00000412453 271 ntBASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 BX664615.1-201ENST00000443558 458 ntBASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A1Q93050 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 SLC25A1P2-201ENST00000430693 912 ntBASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A1Q93050 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms