Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB3IL1Q8TBN0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 AC116351.2-201ENST00000606540 1585 ntBASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 ZNF815P-204ENST00000434898 1737 ntBASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3IL1Q8TBN0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3IL1Q8TBN0 WIZP1-201ENST00000531444 2299 ntBASIC19.14■□□□□ 0.66
RAB3IL1Q8TBN0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB3IL1Q8TBN0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RAB3IL1Q8TBN0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB3IL1Q8TBN0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 AC104581.1-202ENST00000635932 2618 ntBASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB3IL1Q8TBN0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 CYP2T3P-201ENST00000601990 817 ntBASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms