Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 AC139887.4-201ENST00000607877 719 ntBASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 ZNF815P-204ENST00000434898 1737 ntBASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC38A9Q8NBW4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 SDHAP1-207ENST00000440850 2000 ntBASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 AP003041.3-201ENST00000527151 707 ntBASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SLC38A9Q8NBW4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC38A9Q8NBW4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 AC141257.4-201ENST00000634557 245 ntBASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 AC136944.6-201ENST00000634818 245 ntBASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC38A9Q8NBW4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms