Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 PRSS44-201ENST00000515154 1146 ntBASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 BX088651.1-201ENST00000540551 451 ntBASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 FITM1-202ENST00000559294 800 ntBASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 SLC25A1P4-201ENST00000567977 778 ntBASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 AP005242.2-201ENST00000580065 1175 ntBASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 AP000525.1-201ENST00000608286 694 ntBASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 AC096733.2-201ENST00000609937 1394 ntBASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAM1L1Q8N609 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAM1L1Q8N609 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.02■□□□□ 0.63
TRAM1L1Q8N609 KRT8P11-201ENST00000409686 1436 ntBASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 TSPY23P-201ENST00000440136 739 ntBASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAM1L1Q8N609 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 CKBP1-201ENST00000565489 1086 ntBASIC19■□□□□ 0.63
TRAM1L1Q8N609 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 AL032819.2-201ENST00000624543 2162 ntBASIC19■□□□□ 0.63
TRAM1L1Q8N609 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAM1L1Q8N609 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRAM1L1Q8N609 AC007952.6-201ENST00000573168 2673 ntBASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 AC003957.1-201ENST00000625108 2673 ntBASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 TEX21P-204ENST00000641479 1693 ntBASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 MMP23A-201ENST00000234610 1017 ntBASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 MIR1238-201ENST00000408483 83 ntBASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 CRYGFP-201ENST00000418459 633 ntBASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 MFAP1P1-201ENST00000442257 1255 ntBASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAM1L1Q8N609 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms