Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 ECEL1P2-202ENST00000465689 757 ntBASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 FAM87A-204ENST00000613235 858 ntBASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 AL590326.2-201ENST00000625139 305 ntBASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PHTF2Q8N3S3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 AC104076.2-201ENST00000448912 469 ntBASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 AC091390.4-202ENST00000476426 537 ntBASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 SLC25A1P4-201ENST00000567977 778 ntBASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHTF2Q8N3S3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.86■□□□□ 0.77
PHTF2Q8N3S3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 MFAP1P1-201ENST00000442257 1255 ntBASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.85■□□□□ 0.77
PHTF2Q8N3S3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms