Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 AC093787.1-201ENST00000450396 207 ntBASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 AC005181.1-201ENST00000604782 1256 ntBASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 AC083906.6-201ENST00000641366 219 ntBASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01561Q8N1V8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.9□□□□□ -0.35
LINC01561Q8N1V8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01561Q8N1V8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01561Q8N1V8 AL049812.1-201ENST00000432563 2267 ntBASIC12.9□□□□□ -0.35
LINC01561Q8N1V8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC12.9□□□□□ -0.35
LINC01561Q8N1V8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
LINC01561Q8N1V8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC01561Q8N1V8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 NOC2LP1-202ENST00000452600 2235 ntBASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC01561Q8N1V8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 AC106820.2-201ENST00000563775 3264 ntBASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 AC135050.7-201ENST00000624508 2218 ntBASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 AC087623.3-201ENST00000607047 1098 ntBASIC12.88□□□□□ -0.35
LINC01561Q8N1V8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms