Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC50Q8IVM0 ZNF815P-204ENST00000434898 1737 ntBASIC20.27■□□□□ 0.83
CCDC50Q8IVM0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC50Q8IVM0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC50Q8IVM0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC50Q8IVM0 AC093503.3-201ENST00000624917 2352 ntBASIC20.27■□□□□ 0.83
CCDC50Q8IVM0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.27■□□□□ 0.83
CCDC50Q8IVM0 BCL2-203ENST00000589955 5011 ntBASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 AL121906.2-201ENST00000621597 723 ntBASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 HLA-B-256ENST00000639848 1089 ntBASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 AP006587.1-201ENST00000534129 1502 ntBASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC50Q8IVM0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 MYC-209ENST00000641252 345 ntBASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 TEX21P-204ENST00000641479 1693 ntBASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC50Q8IVM0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 PNMA6B-201ENST00000538162 1200 ntBASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 AC098934.4-201ENST00000564127 592 ntBASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 AC092666.2-201ENST00000613287 246 ntBASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC50Q8IVM0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms