Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC120114.3-201ENST00000611923 658 ntBASIC24.19■■□□□ 1.46
COL23A1Q86Y22 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL23A1Q86Y22 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 MIR662-201ENST00000384847 95 ntBASIC24.18■■□□□ 1.46
COL23A1Q86Y22 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 KRT16P4-201ENST00000453883 522 ntBASIC24.18■■□□□ 1.46
COL23A1Q86Y22 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 TOB2P1-201ENST00000469761 992 ntBASIC24.18■■□□□ 1.46
COL23A1Q86Y22 AC012615.1-201ENST00000565797 1299 ntBASIC24.18■■□□□ 1.46
COL23A1Q86Y22 RNF126P1-202ENST00000569893 925 ntBASIC24.18■■□□□ 1.46
COL23A1Q86Y22 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 LINC01711-201ENST00000598340 967 ntBASIC24.18■■□□□ 1.46
COL23A1Q86Y22 AL121912.1-201ENST00000603683 238 ntBASIC24.18■■□□□ 1.46
COL23A1Q86Y22 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 BX640515.1-201ENST00000617215 977 ntBASIC24.18■■□□□ 1.46
COL23A1Q86Y22 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.18■■□□□ 1.46
COL23A1Q86Y22 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.18■■□□□ 1.46
COL23A1Q86Y22 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
COL23A1Q86Y22 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 TSPY12P-201ENST00000421279 868 ntBASIC24.16■■□□□ 1.46
COL23A1Q86Y22 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL23A1Q86Y22 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 GPAT2P1-201ENST00000444924 1672 ntBASIC24.15■■□□□ 1.46
COL23A1Q86Y22 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 VPS51-217ENST00000639871 243 ntTSL 5 BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL23A1Q86Y22 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.14■■□□□ 1.46
COL23A1Q86Y22 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL23A1Q86Y22 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
COL23A1Q86Y22 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 SEC1P-202ENST00000473944 940 ntBASIC24.14■■□□□ 1.45
COL23A1Q86Y22 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 AC117500.6-201ENST00000624871 588 ntBASIC24.14■■□□□ 1.45
COL23A1Q86Y22 AL157888.1-201ENST00000631930 593 ntBASIC24.14■■□□□ 1.45
COL23A1Q86Y22 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL23A1Q86Y22 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
COL23A1Q86Y22 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms