Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 AC096733.2-201ENST00000609937 1394 ntBASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LRRTM4Q86VH4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 MFAP1P1-201ENST00000442257 1255 ntBASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 AC133561.5-201ENST00000635547 218 ntBASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRTM4Q86VH4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 KRT8P9-201ENST00000558927 1449 ntBASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 NAPSB-206ENST00000562112 1266 ntBASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRTM4Q86VH4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 AC211429.1-201ENST00000415277 523 ntBASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRTM4Q86VH4 TSPY21P-201ENST00000433481 731 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms