Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 FAM21FP-204ENST00000608637 956 ntBASIC15.97■□□□□ 0.15
ZNF546Q86UE3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF546Q86UE3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 KRT16P2-201ENST00000414673 1423 ntBASIC15.96■□□□□ 0.15
ZNF546Q86UE3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 MIR572-201ENST00000384983 95 ntBASIC15.96■□□□□ 0.15
ZNF546Q86UE3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ZNF546Q86UE3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.96■□□□□ 0.14
ZNF546Q86UE3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ZNF546Q86UE3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
ZNF546Q86UE3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
ZNF546Q86UE3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 KRT16P6-202ENST00000425692 1426 ntBASIC15.95■□□□□ 0.14
ZNF546Q86UE3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ZNF546Q86UE3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.94■□□□□ 0.14
ZNF546Q86UE3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms