Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 TNXA-203ENST00000507684 2038 ntBASIC19.19■□□□□ 0.66
LDB1Q86U70 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
LDB1Q86U70 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.19■□□□□ 0.66
LDB1Q86U70 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.19■□□□□ 0.66
LDB1Q86U70 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.19■□□□□ 0.66
LDB1Q86U70 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.19■□□□□ 0.66
LDB1Q86U70 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.19■□□□□ 0.66
LDB1Q86U70 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.19■□□□□ 0.66
LDB1Q86U70 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.19■□□□□ 0.66
LDB1Q86U70 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.19■□□□□ 0.66
LDB1Q86U70 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.19■□□□□ 0.66
LDB1Q86U70 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.19■□□□□ 0.66
LDB1Q86U70 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LDB1Q86U70 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LDB1Q86U70 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
LDB1Q86U70 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.18■□□□□ 0.66
LDB1Q86U70 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.18■□□□□ 0.66
LDB1Q86U70 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LDB1Q86U70 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
LDB1Q86U70 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
LDB1Q86U70 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LDB1Q86U70 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LDB1Q86U70 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LDB1Q86U70 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.18■□□□□ 0.66
LDB1Q86U70 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.18■□□□□ 0.66
LDB1Q86U70 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.18■□□□□ 0.66
LDB1Q86U70 AC110285.5-201ENST00000611501 352 ntBASIC19.18■□□□□ 0.66
LDB1Q86U70 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LDB1Q86U70 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LDB1Q86U70 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LDB1Q86U70 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB1Q86U70 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LDB1Q86U70 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
LDB1Q86U70 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LDB1Q86U70 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.17■□□□□ 0.66
LDB1Q86U70 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LDB1Q86U70 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.17■□□□□ 0.66
LDB1Q86U70 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.17■□□□□ 0.66
LDB1Q86U70 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
LDB1Q86U70 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LDB1Q86U70 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.17■□□□□ 0.66
LDB1Q86U70 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 KRT16P5-201ENST00000455284 522 ntBASIC19.17■□□□□ 0.66
LDB1Q86U70 AC133681.1-201ENST00000465482 601 ntBASIC19.17■□□□□ 0.66
LDB1Q86U70 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LDB1Q86U70 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LDB1Q86U70 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.17■□□□□ 0.66
LDB1Q86U70 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
LDB1Q86U70 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LDB1Q86U70 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.17■□□□□ 0.66
LDB1Q86U70 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.17■□□□□ 0.66
LDB1Q86U70 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.17■□□□□ 0.66
LDB1Q86U70 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
LDB1Q86U70 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB1Q86U70 AL020996.1-203ENST00000536896 2307 ntBASIC19.17■□□□□ 0.66
LDB1Q86U70 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
LDB1Q86U70 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDB1Q86U70 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms