Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00336Q6ZUF6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 MIR3652-201ENST00000579335 131 ntBASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 NEK4P2-201ENST00000580004 1012 ntBASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 GPALPP1-207ENST00000611650 899 ntBASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 HLA-A-209ENST00000638375 975 ntBASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00336Q6ZUF6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC12.9□□□□□ -0.35
LINC00336Q6ZUF6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00336Q6ZUF6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 AC112907.2-201ENST00000448639 330 ntBASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 AC008040.2-201ENST00000461049 708 ntBASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 AC018553.1-201ENST00000616682 1458 ntBASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00336Q6ZUF6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms