Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 SLC7A5P2-201ENST00000553010 536 ntBASIC16.71■□□□□ 0.27
C11orf88Q6PI97 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.71■□□□□ 0.27
C11orf88Q6PI97 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 AC116050.2-201ENST00000612102 1779 ntBASIC16.71■□□□□ 0.27
C11orf88Q6PI97 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf88Q6PI97 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
C11orf88Q6PI97 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
C11orf88Q6PI97 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
C11orf88Q6PI97 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.26
C11orf88Q6PI97 KRT16P2-201ENST00000414673 1423 ntBASIC16.7■□□□□ 0.26
C11orf88Q6PI97 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 AC007322.4-201ENST00000509611 723 ntBASIC16.7■□□□□ 0.26
C11orf88Q6PI97 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.7■□□□□ 0.26
C11orf88Q6PI97 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 AC073210.2-201ENST00000430369 194 ntBASIC16.69■□□□□ 0.26
C11orf88Q6PI97 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 AF201337.1-201ENST00000520239 748 ntBASIC16.69■□□□□ 0.26
C11orf88Q6PI97 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 AL032819.2-201ENST00000624543 2162 ntBASIC16.69■□□□□ 0.26
C11orf88Q6PI97 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf88Q6PI97 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
C11orf88Q6PI97 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms