Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 CYP2T3P-201ENST00000601990 817 ntBASIC18.48■□□□□ 0.55
RNF220Q5VTB9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF220Q5VTB9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF220Q5VTB9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RNF220Q5VTB9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 AC011270.2-201ENST00000624293 2550 ntBASIC18.45■□□□□ 0.54
RNF220Q5VTB9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF220Q5VTB9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RNF220Q5VTB9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF220Q5VTB9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF220Q5VTB9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF220Q5VTB9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF220Q5VTB9 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms