Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 KRT16P6-202ENST00000425692 1426 ntBASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RSPO4Q2I0M5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RSPO4Q2I0M5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RSPO4Q2I0M5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RSPO4Q2I0M5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO4Q2I0M5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.63■□□□□ 0.57
RSPO4Q2I0M5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 RNA5SP419-201ENST00000515908 135 ntBASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 AC106730.1-201ENST00000566722 1090 ntBASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RSPO4Q2I0M5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 AL773604.1-201ENST00000617417 272 ntBASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO4Q2I0M5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO4Q2I0M5 AKR1C7P-201ENST00000305623 895 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms