Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.43■□□□□ 0.7
CDH17Q12864 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH17Q12864 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH17Q12864 KRASP1-201ENST00000407852 552 ntBASIC19.43■□□□□ 0.7
CDH17Q12864 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.43■□□□□ 0.7
CDH17Q12864 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CDH17Q12864 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH17Q12864 HLA-A-209ENST00000638375 975 ntBASIC19.43■□□□□ 0.7
CDH17Q12864 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH17Q12864 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH17Q12864 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH17Q12864 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH17Q12864 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH17Q12864 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CDH17Q12864 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH17Q12864 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDH17Q12864 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH17Q12864 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH17Q12864 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH17Q12864 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 KRT16P5-201ENST00000455284 522 ntBASIC19.42■□□□□ 0.7
CDH17Q12864 AL160286.2-201ENST00000567150 934 ntBASIC19.42■□□□□ 0.7
CDH17Q12864 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDH17Q12864 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CDH17Q12864 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 AC004408.2-201ENST00000623613 2777 ntBASIC19.42■□□□□ 0.7
CDH17Q12864 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH17Q12864 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH17Q12864 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH17Q12864 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH17Q12864 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDH17Q12864 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH17Q12864 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDH17Q12864 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CDH17Q12864 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH17Q12864 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 CD99P1-205ENST00000527459 561 ntBASIC19.41■□□□□ 0.7
CDH17Q12864 AC006058.3-201ENST00000606217 1069 ntBASIC19.41■□□□□ 0.7
CDH17Q12864 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH17Q12864 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH17Q12864 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH17Q12864 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDH17Q12864 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH17Q12864 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.41■□□□□ 0.7
CDH17Q12864 FP475955.4-201ENST00000623131 1990 ntBASIC19.41■□□□□ 0.7
CDH17Q12864 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
CDH17Q12864 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CDH17Q12864 IRX1P1-201ENST00000438849 1838 ntBASIC19.4■□□□□ 0.7
CDH17Q12864 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH17Q12864 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH17Q12864 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH17Q12864 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH17Q12864 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 AC133681.1-201ENST00000465482 601 ntBASIC19.4■□□□□ 0.7
CDH17Q12864 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH17Q12864 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH17Q12864 RN7SL471P-201ENST00000580476 299 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms