Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP46P62068 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP46P62068 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP46P62068 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.23■□□□□ 0.83
USP46P62068 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.23■□□□□ 0.83
USP46P62068 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP46P62068 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.22■□□□□ 0.83
USP46P62068 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP46P62068 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
USP46P62068 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP46P62068 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP46P62068 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.22■□□□□ 0.83
USP46P62068 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP46P62068 TSPY14P-201ENST00000303979 915 ntBASIC20.22■□□□□ 0.83
USP46P62068 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
USP46P62068 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP46P62068 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.22■□□□□ 0.83
USP46P62068 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.22■□□□□ 0.83
USP46P62068 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.22■□□□□ 0.83
USP46P62068 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.22■□□□□ 0.83
USP46P62068 RN7SL850P-201ENST00000579959 291 ntBASIC20.22■□□□□ 0.83
USP46P62068 AC005363.2-201ENST00000618631 242 ntBASIC20.22■□□□□ 0.83
USP46P62068 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.22■□□□□ 0.83
USP46P62068 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP46P62068 KRT18P22-201ENST00000402024 1347 ntBASIC20.22■□□□□ 0.83
USP46P62068 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
USP46P62068 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP46P62068 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP46P62068 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.22■□□□□ 0.83
USP46P62068 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP46P62068 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.21■□□□□ 0.83
USP46P62068 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP46P62068 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP46P62068 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.21■□□□□ 0.83
USP46P62068 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.21■□□□□ 0.83
USP46P62068 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP46P62068 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP46P62068 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.21■□□□□ 0.83
USP46P62068 AC005521.1-201ENST00000393351 872 ntBASIC20.21■□□□□ 0.83
USP46P62068 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.21■□□□□ 0.83
USP46P62068 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.21■□□□□ 0.83
USP46P62068 ECEL1P2-202ENST00000465689 757 ntBASIC20.21■□□□□ 0.83
USP46P62068 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.21■□□□□ 0.83
USP46P62068 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.21■□□□□ 0.83
USP46P62068 C2orf69P3-201ENST00000565542 1120 ntBASIC20.21■□□□□ 0.83
USP46P62068 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.21■□□□□ 0.83
USP46P62068 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP46P62068 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.21■□□□□ 0.83
USP46P62068 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.21■□□□□ 0.83
USP46P62068 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.21■□□□□ 0.83
USP46P62068 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP46P62068 ZNF815P-204ENST00000434898 1737 ntBASIC20.21■□□□□ 0.83
USP46P62068 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
USP46P62068 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP46P62068 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
USP46P62068 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
USP46P62068 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.2■□□□□ 0.82
USP46P62068 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.2■□□□□ 0.82
USP46P62068 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.2■□□□□ 0.82
USP46P62068 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USP46P62068 EGLN1P1-201ENST00000531623 762 ntBASIC20.2■□□□□ 0.82
USP46P62068 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.2■□□□□ 0.82
USP46P62068 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
USP46P62068 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.2■□□□□ 0.82
USP46P62068 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.2■□□□□ 0.82
USP46P62068 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USP46P62068 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.2■□□□□ 0.82
USP46P62068 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP46P62068 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 SDHAP1-207ENST00000440850 2000 ntBASIC20.19■□□□□ 0.82
USP46P62068 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
USP46P62068 TREX1-205ENST00000625293 1783 ntBASIC20.19■□□□□ 0.82
USP46P62068 AL020996.1-203ENST00000536896 2307 ntBASIC20.19■□□□□ 0.82
USP46P62068 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.19■□□□□ 0.82
USP46P62068 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 AC113347.1-201ENST00000413321 391 ntBASIC20.19■□□□□ 0.82
USP46P62068 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 SLC25A3P1-201ENST00000443844 931 ntBASIC20.19■□□□□ 0.82
USP46P62068 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP46P62068 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
USP46P62068 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
USP46P62068 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP46P62068 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms