Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.72■■□□□ 1.71
ZC3H6P61129 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H6P61129 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
ZC3H6P61129 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H6P61129 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC25.71■■□□□ 1.71
ZC3H6P61129 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H6P61129 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H6P61129 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H6P61129 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
ZC3H6P61129 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC25.71■■□□□ 1.71
ZC3H6P61129 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC25.71■■□□□ 1.71
ZC3H6P61129 AL121672.3-201ENST00000608644 468 ntBASIC25.71■■□□□ 1.71
ZC3H6P61129 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.71■■□□□ 1.71
ZC3H6P61129 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H6P61129 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.71■■□□□ 1.71
ZC3H6P61129 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H6P61129 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC25.71■■□□□ 1.71
ZC3H6P61129 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H6P61129 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
ZC3H6P61129 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC25.7■■□□□ 1.71
ZC3H6P61129 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
ZC3H6P61129 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
ZC3H6P61129 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.7■■□□□ 1.71
ZC3H6P61129 KRT17P6-201ENST00000453795 1220 ntBASIC25.7■■□□□ 1.7
ZC3H6P61129 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC25.7■■□□□ 1.7
ZC3H6P61129 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC25.7■■□□□ 1.7
ZC3H6P61129 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC25.7■■□□□ 1.7
ZC3H6P61129 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
ZC3H6P61129 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.7■■□□□ 1.7
ZC3H6P61129 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC25.7■■□□□ 1.7
ZC3H6P61129 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ZC3H6P61129 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H6P61129 AC020907.5-201ENST00000624372 1936 ntBASIC25.69■■□□□ 1.7
ZC3H6P61129 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H6P61129 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.69■■□□□ 1.7
ZC3H6P61129 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.69■■□□□ 1.7
ZC3H6P61129 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H6P61129 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H6P61129 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H6P61129 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC25.69■■□□□ 1.7
ZC3H6P61129 AC034232.1-201ENST00000506026 1064 ntBASIC25.69■■□□□ 1.7
ZC3H6P61129 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC25.69■■□□□ 1.7
ZC3H6P61129 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC25.69■■□□□ 1.7
ZC3H6P61129 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC25.69■■□□□ 1.7
ZC3H6P61129 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H6P61129 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
ZC3H6P61129 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H6P61129 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
ZC3H6P61129 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H6P61129 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC25.69■■□□□ 1.7
ZC3H6P61129 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ZC3H6P61129 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.68■■□□□ 1.7
ZC3H6P61129 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC25.68■■□□□ 1.7
ZC3H6P61129 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC25.68■■□□□ 1.7
ZC3H6P61129 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC25.68■■□□□ 1.7
ZC3H6P61129 TBCB-205ENST00000585746 875 ntTSL 3 BASIC25.68■■□□□ 1.7
ZC3H6P61129 AP002414.4-201ENST00000589764 1148 ntBASIC25.68■■□□□ 1.7
ZC3H6P61129 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
ZC3H6P61129 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
ZC3H6P61129 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
ZC3H6P61129 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
ZC3H6P61129 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ZC3H6P61129 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H6P61129 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
ZC3H6P61129 AL391422.3-201ENST00000603791 2761 ntBASIC25.67■■□□□ 1.7
ZC3H6P61129 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H6P61129 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC25.67■■□□□ 1.7
ZC3H6P61129 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC25.67■■□□□ 1.7
ZC3H6P61129 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
ZC3H6P61129 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.67■■□□□ 1.7
ZC3H6P61129 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H6P61129 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
ZC3H6P61129 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC25.67■■□□□ 1.7
ZC3H6P61129 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H6P61129 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H6P61129 GPAT2P1-201ENST00000444924 1672 ntBASIC25.67■■□□□ 1.7
ZC3H6P61129 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H6P61129 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H6P61129 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZC3H6P61129 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H6P61129 AC009237.14-201ENST00000609975 1594 ntBASIC25.66■■□□□ 1.7
ZC3H6P61129 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H6P61129 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H6P61129 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H6P61129 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H6P61129 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
ZC3H6P61129 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H6P61129 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ZC3H6P61129 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC25.66■■□□□ 1.7
ZC3H6P61129 AC009078.2-202ENST00000463353 338 ntBASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms