Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.84■□□□□ 0.77
EIF3EP60228 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.84■□□□□ 0.77
EIF3EP60228 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.84■□□□□ 0.77
EIF3EP60228 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
EIF3EP60228 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.84■□□□□ 0.77
EIF3EP60228 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.84■□□□□ 0.77
EIF3EP60228 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3EP60228 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 AC006333.2-201ENST00000607957 2099 ntBASIC19.83■□□□□ 0.77
EIF3EP60228 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.83■□□□□ 0.77
EIF3EP60228 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
EIF3EP60228 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.83■□□□□ 0.77
EIF3EP60228 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
EIF3EP60228 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.83■□□□□ 0.77
EIF3EP60228 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
EIF3EP60228 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
EIF3EP60228 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.83■□□□□ 0.77
EIF3EP60228 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.83■□□□□ 0.77
EIF3EP60228 RNA5SP413-201ENST00000516373 109 ntBASIC19.83■□□□□ 0.77
EIF3EP60228 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.83■□□□□ 0.77
EIF3EP60228 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.83■□□□□ 0.77
EIF3EP60228 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3EP60228 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3EP60228 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3EP60228 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3EP60228 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3EP60228 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.83■□□□□ 0.76
EIF3EP60228 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
EIF3EP60228 CROCCP3-202ENST00000420820 1947 ntBASIC19.82■□□□□ 0.76
EIF3EP60228 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 ID1-201ENST00000376105 1233 ntBASIC19.82■□□□□ 0.76
EIF3EP60228 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.82■□□□□ 0.76
EIF3EP60228 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.82■□□□□ 0.76
EIF3EP60228 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.82■□□□□ 0.76
EIF3EP60228 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.82■□□□□ 0.76
EIF3EP60228 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.82■□□□□ 0.76
EIF3EP60228 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.82■□□□□ 0.76
EIF3EP60228 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.82■□□□□ 0.76
EIF3EP60228 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.82■□□□□ 0.76
EIF3EP60228 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
EIF3EP60228 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.82■□□□□ 0.76
EIF3EP60228 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
EIF3EP60228 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3EP60228 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
EIF3EP60228 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 IRX1P1-201ENST00000438849 1838 ntBASIC19.81■□□□□ 0.76
EIF3EP60228 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.81■□□□□ 0.76
EIF3EP60228 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 NBPF21P-201ENST00000425093 1451 ntBASIC19.81■□□□□ 0.76
EIF3EP60228 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.81■□□□□ 0.76
EIF3EP60228 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.81■□□□□ 0.76
EIF3EP60228 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.81■□□□□ 0.76
EIF3EP60228 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 AP003097.1-201ENST00000530657 1135 ntBASIC19.81■□□□□ 0.76
EIF3EP60228 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
EIF3EP60228 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
EIF3EP60228 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms