Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASP6P55212 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASP6P55212 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASP6P55212 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CASP6P55212 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CASP6P55212 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.27■□□□□ 0.36
CASP6P55212 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.27■□□□□ 0.36
CASP6P55212 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.27■□□□□ 0.36
CASP6P55212 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.27■□□□□ 0.36
CASP6P55212 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.27■□□□□ 0.36
CASP6P55212 MYC-208ENST00000641036 567 ntBASIC17.27■□□□□ 0.36
CASP6P55212 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASP6P55212 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.27■□□□□ 0.35
CASP6P55212 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASP6P55212 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CASP6P55212 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CASP6P55212 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CASP6P55212 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CASP6P55212 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.27■□□□□ 0.35
CASP6P55212 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CASP6P55212 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASP6P55212 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CASP6P55212 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP6P55212 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP6P55212 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP6P55212 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASP6P55212 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.26■□□□□ 0.35
CASP6P55212 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP6P55212 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP6P55212 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CASP6P55212 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASP6P55212 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.26■□□□□ 0.35
CASP6P55212 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.26■□□□□ 0.35
CASP6P55212 KRT18P56-201ENST00000507275 550 ntBASIC17.26■□□□□ 0.35
CASP6P55212 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.26■□□□□ 0.35
CASP6P55212 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.26■□□□□ 0.35
CASP6P55212 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP6P55212 AL023803.3-201ENST00000615559 522 ntBASIC17.26■□□□□ 0.35
CASP6P55212 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP6P55212 AC011558.1-201ENST00000623459 338 ntBASIC17.26■□□□□ 0.35
CASP6P55212 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP6P55212 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP6P55212 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASP6P55212 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.26■□□□□ 0.35
CASP6P55212 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.26■□□□□ 0.35
CASP6P55212 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.26■□□□□ 0.35
CASP6P55212 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP6P55212 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.26■□□□□ 0.35
CASP6P55212 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASP6P55212 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASP6P55212 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASP6P55212 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASP6P55212 SMG8-203ENST00000578922 2178 ntBASIC17.25■□□□□ 0.35
CASP6P55212 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.25■□□□□ 0.35
CASP6P55212 PCED1CP-201ENST00000419887 785 ntBASIC17.25■□□□□ 0.35
CASP6P55212 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.25■□□□□ 0.35
CASP6P55212 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CASP6P55212 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CASP6P55212 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.25■□□□□ 0.35
CASP6P55212 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.25■□□□□ 0.35
CASP6P55212 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CASP6P55212 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.25■□□□□ 0.35
CASP6P55212 IER3-202ENST00000376377 1350 ntBASIC17.25■□□□□ 0.35
CASP6P55212 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.25■□□□□ 0.35
CASP6P55212 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASP6P55212 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CASP6P55212 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CASP6P55212 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.24■□□□□ 0.35
CASP6P55212 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.24■□□□□ 0.35
CASP6P55212 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.24■□□□□ 0.35
CASP6P55212 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.24■□□□□ 0.35
CASP6P55212 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASP6P55212 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASP6P55212 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.24■□□□□ 0.35
CASP6P55212 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASP6P55212 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASP6P55212 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CASP6P55212 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.23■□□□□ 0.35
CASP6P55212 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.23■□□□□ 0.35
CASP6P55212 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASP6P55212 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASP6P55212 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.23■□□□□ 0.35
CASP6P55212 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASP6P55212 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CASP6P55212 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASP6P55212 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASP6P55212 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.23■□□□□ 0.35
CASP6P55212 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.23■□□□□ 0.35
CASP6P55212 AC009947.2-201ENST00000444014 672 ntBASIC17.23■□□□□ 0.35
CASP6P55212 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms