Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LBX1P52954 SEC1P-202ENST00000473944 940 ntBASIC21.81■■□□□ 1.08
LBX1P52954 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.81■■□□□ 1.08
LBX1P52954 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.81■■□□□ 1.08
LBX1P52954 AC005332.3-201ENST00000589904 676 ntBASIC21.81■■□□□ 1.08
LBX1P52954 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.81■■□□□ 1.08
LBX1P52954 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LBX1P52954 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.81■■□□□ 1.08
LBX1P52954 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
LBX1P52954 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
LBX1P52954 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LBX1P52954 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.8■■□□□ 1.08
LBX1P52954 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.8■■□□□ 1.08
LBX1P52954 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LBX1P52954 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.8■■□□□ 1.08
LBX1P52954 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.8■■□□□ 1.08
LBX1P52954 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.8■■□□□ 1.08
LBX1P52954 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.8■■□□□ 1.08
LBX1P52954 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.8■■□□□ 1.08
LBX1P52954 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.8■■□□□ 1.08
LBX1P52954 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LBX1P52954 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LBX1P52954 AC145285.3-201ENST00000564603 959 ntBASIC21.8■■□□□ 1.08
LBX1P52954 AL355877.3-201ENST00000622820 899 ntBASIC21.8■■□□□ 1.08
LBX1P52954 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LBX1P52954 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LBX1P52954 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LBX1P52954 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.79■■□□□ 1.08
LBX1P52954 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.79■■□□□ 1.08
LBX1P52954 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LBX1P52954 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LBX1P52954 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
LBX1P52954 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
LBX1P52954 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.79■■□□□ 1.08
LBX1P52954 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.79■■□□□ 1.08
LBX1P52954 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
LBX1P52954 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.79■■□□□ 1.08
LBX1P52954 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LBX1P52954 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LBX1P52954 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LBX1P52954 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LBX1P52954 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
LBX1P52954 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LBX1P52954 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LBX1P52954 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LBX1P52954 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.78■■□□□ 1.08
LBX1P52954 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.78■■□□□ 1.08
LBX1P52954 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LBX1P52954 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LBX1P52954 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.78■■□□□ 1.08
LBX1P52954 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.78■■□□□ 1.08
LBX1P52954 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.78■■□□□ 1.08
LBX1P52954 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.78■■□□□ 1.08
LBX1P52954 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LBX1P52954 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.78■■□□□ 1.08
LBX1P52954 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.78■■□□□ 1.08
LBX1P52954 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LBX1P52954 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LBX1P52954 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.78■■□□□ 1.08
LBX1P52954 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
LBX1P52954 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LBX1P52954 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LBX1P52954 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
LBX1P52954 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LBX1P52954 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LBX1P52954 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LBX1P52954 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LBX1P52954 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
LBX1P52954 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.77■■□□□ 1.08
LBX1P52954 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LBX1P52954 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LBX1P52954 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.77■■□□□ 1.08
LBX1P52954 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LBX1P52954 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
LBX1P52954 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
LBX1P52954 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LBX1P52954 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LBX1P52954 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LBX1P52954 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.76■■□□□ 1.07
LBX1P52954 HNRNPDP1-201ENST00000439535 754 ntBASIC21.76■■□□□ 1.07
LBX1P52954 AL591424.1-201ENST00000442569 1213 ntBASIC21.76■■□□□ 1.07
LBX1P52954 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LBX1P52954 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.76■■□□□ 1.07
LBX1P52954 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.76■■□□□ 1.07
LBX1P52954 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.76■■□□□ 1.07
LBX1P52954 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.76■■□□□ 1.07
LBX1P52954 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.76■■□□□ 1.07
LBX1P52954 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.76■■□□□ 1.07
LBX1P52954 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.76■■□□□ 1.07
LBX1P52954 AC008608.2-201ENST00000606089 416 ntBASIC21.76■■□□□ 1.07
LBX1P52954 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LBX1P52954 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LBX1P52954 AL121603.2-201ENST00000557373 2117 ntBASIC21.76■■□□□ 1.07
LBX1P52954 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms