Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HCFC1P51610 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HCFC1P51610 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.78■□□□□ 0.28
HCFC1P51610 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HCFC1P51610 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC1P51610 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC1P51610 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC1P51610 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC1P51610 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
HCFC1P51610 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1P51610 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.77■□□□□ 0.28
HCFC1P51610 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC1P51610 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC1P51610 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1P51610 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1P51610 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC1P51610 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1P51610 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
HCFC1P51610 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1P51610 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1P51610 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC1P51610 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.77■□□□□ 0.27
HCFC1P51610 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1P51610 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.77■□□□□ 0.27
HCFC1P51610 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1P51610 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1P51610 SPDYE15P-201ENST00000424157 909 ntBASIC16.77■□□□□ 0.27
HCFC1P51610 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1P51610 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.77■□□□□ 0.27
HCFC1P51610 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.77■□□□□ 0.27
HCFC1P51610 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1P51610 AL031432.5-201ENST00000641059 760 ntBASIC16.77■□□□□ 0.27
HCFC1P51610 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
HCFC1P51610 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
HCFC1P51610 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
HCFC1P51610 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
HCFC1P51610 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC1P51610 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC1P51610 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HCFC1P51610 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HCFC1P51610 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HCFC1P51610 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC1P51610 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.76■□□□□ 0.27
HCFC1P51610 SPDYE13P-201ENST00000445314 798 ntBASIC16.76■□□□□ 0.27
HCFC1P51610 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
HCFC1P51610 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.76■□□□□ 0.27
HCFC1P51610 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 KRT8P11-201ENST00000409686 1436 ntBASIC16.76■□□□□ 0.27
HCFC1P51610 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC1P51610 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HCFC1P51610 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.76■□□□□ 0.27
HCFC1P51610 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.76■□□□□ 0.27
HCFC1P51610 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC1P51610 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC1P51610 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC1P51610 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
HCFC1P51610 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.76■□□□□ 0.27
HCFC1P51610 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.76■□□□□ 0.27
HCFC1P51610 AP000523.1-201ENST00000398242 1049 ntBASIC16.75■□□□□ 0.27
HCFC1P51610 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.75■□□□□ 0.27
HCFC1P51610 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.75■□□□□ 0.27
HCFC1P51610 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.75■□□□□ 0.27
HCFC1P51610 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.75■□□□□ 0.27
HCFC1P51610 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.75■□□□□ 0.27
HCFC1P51610 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.75■□□□□ 0.27
HCFC1P51610 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.75■□□□□ 0.27
HCFC1P51610 KRT8P10-201ENST00000450021 1447 ntBASIC16.75■□□□□ 0.27
HCFC1P51610 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC1P51610 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC1P51610 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
HCFC1P51610 AL691432.2-201ENST00000607222 2038 ntBASIC16.75■□□□□ 0.27
HCFC1P51610 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC1P51610 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.75■□□□□ 0.27
HCFC1P51610 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
HCFC1P51610 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HCFC1P51610 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.75■□□□□ 0.27
HCFC1P51610 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
HCFC1P51610 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC1P51610 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.75■□□□□ 0.27
HCFC1P51610 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC1P51610 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
HCFC1P51610 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC1P51610 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.75■□□□□ 0.27
HCFC1P51610 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.75■□□□□ 0.27
HCFC1P51610 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.75■□□□□ 0.27
HCFC1P51610 AL136038.3-201ENST00000561909 1096 ntBASIC16.75■□□□□ 0.27
HCFC1P51610 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
HCFC1P51610 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HCFC1P51610 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.75■□□□□ 0.27
HCFC1P51610 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC1P51610 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms