Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC1A3P43003 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC1A3P43003 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A3P43003 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A3P43003 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A3P43003 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A3P43003 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A3P43003 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC1A3P43003 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC1A3P43003 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC1A3P43003 AC233263.1-201ENST00000578059 224 ntBASIC17.67■□□□□ 0.42
SLC1A3P43003 AC004264.1-201ENST00000608354 794 ntBASIC17.67■□□□□ 0.42
SLC1A3P43003 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.67■□□□□ 0.42
SLC1A3P43003 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A3P43003 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC1A3P43003 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SLC1A3P43003 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SLC1A3P43003 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC1A3P43003 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC1A3P43003 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A3P43003 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
SLC1A3P43003 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC1A3P43003 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A3P43003 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A3P43003 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A3P43003 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC1A3P43003 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A3P43003 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC1A3P43003 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A3P43003 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A3P43003 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A3P43003 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC1A3P43003 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A3P43003 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC1A3P43003 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC1A3P43003 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC1A3P43003 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A3P43003 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A3P43003 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A3P43003 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A3P43003 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A3P43003 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.65■□□□□ 0.42
SLC1A3P43003 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A3P43003 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A3P43003 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A3P43003 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A3P43003 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC1A3P43003 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SLC1A3P43003 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SLC1A3P43003 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A3P43003 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLC1A3P43003 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC1A3P43003 AC006058.3-201ENST00000606217 1069 ntBASIC17.65■□□□□ 0.42
SLC1A3P43003 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC1A3P43003 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SLC1A3P43003 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SLC1A3P43003 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC1A3P43003 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC1A3P43003 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC1A3P43003 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A3P43003 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC1A3P43003 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC1A3P43003 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC1A3P43003 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms