Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL8A2P25067 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL8A2P25067 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL8A2P25067 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.24■□□□□ 0.19
COL8A2P25067 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
COL8A2P25067 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL8A2P25067 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.24■□□□□ 0.19
COL8A2P25067 INGX-201ENST00000359239 846 ntBASIC16.24■□□□□ 0.19
COL8A2P25067 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL8A2P25067 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.24■□□□□ 0.19
COL8A2P25067 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.24■□□□□ 0.19
COL8A2P25067 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.24■□□□□ 0.19
COL8A2P25067 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.24■□□□□ 0.19
COL8A2P25067 ECEL1P2-202ENST00000465689 757 ntBASIC16.24■□□□□ 0.19
COL8A2P25067 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.24■□□□□ 0.19
COL8A2P25067 EGLN1P1-201ENST00000531623 762 ntBASIC16.24■□□□□ 0.19
COL8A2P25067 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL8A2P25067 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.24■□□□□ 0.19
COL8A2P25067 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.24■□□□□ 0.19
COL8A2P25067 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
COL8A2P25067 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL8A2P25067 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.24■□□□□ 0.19
COL8A2P25067 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL8A2P25067 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL8A2P25067 KRT8P41-201ENST00000533985 1514 ntBASIC16.24■□□□□ 0.19
COL8A2P25067 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL8A2P25067 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL8A2P25067 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL8A2P25067 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.23■□□□□ 0.19
COL8A2P25067 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.23■□□□□ 0.19
COL8A2P25067 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL8A2P25067 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.23■□□□□ 0.19
COL8A2P25067 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COL8A2P25067 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL8A2P25067 TSPY14P-201ENST00000303979 915 ntBASIC16.23■□□□□ 0.19
COL8A2P25067 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.23■□□□□ 0.19
COL8A2P25067 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.23■□□□□ 0.19
COL8A2P25067 TMPOP1-202ENST00000424642 1267 ntBASIC16.23■□□□□ 0.19
COL8A2P25067 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.23■□□□□ 0.19
COL8A2P25067 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.23■□□□□ 0.19
COL8A2P25067 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.23■□□□□ 0.19
COL8A2P25067 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.23■□□□□ 0.19
COL8A2P25067 AC010331.1-201ENST00000611423 582 ntBASIC16.23■□□□□ 0.19
COL8A2P25067 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.23■□□□□ 0.19
COL8A2P25067 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL8A2P25067 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.23■□□□□ 0.19
COL8A2P25067 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL8A2P25067 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COL8A2P25067 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.23■□□□□ 0.19
COL8A2P25067 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
COL8A2P25067 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.23■□□□□ 0.19
COL8A2P25067 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL8A2P25067 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.22■□□□□ 0.19
COL8A2P25067 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.22■□□□□ 0.19
COL8A2P25067 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.22■□□□□ 0.19
COL8A2P25067 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
COL8A2P25067 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.22■□□□□ 0.19
COL8A2P25067 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COL8A2P25067 AL137013.1-201ENST00000432946 1228 ntBASIC16.22■□□□□ 0.19
COL8A2P25067 SLC25A3P1-201ENST00000443844 931 ntBASIC16.22■□□□□ 0.19
COL8A2P25067 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.22■□□□□ 0.19
COL8A2P25067 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 AC096733.2-201ENST00000609937 1394 ntBASIC16.22■□□□□ 0.19
COL8A2P25067 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COL8A2P25067 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.22■□□□□ 0.19
COL8A2P25067 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL8A2P25067 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.21■□□□□ 0.19
COL8A2P25067 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COL8A2P25067 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COL8A2P25067 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.21■□□□□ 0.19
COL8A2P25067 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 AC113347.1-201ENST00000413321 391 ntBASIC16.21■□□□□ 0.19
COL8A2P25067 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.21■□□□□ 0.19
COL8A2P25067 AC128688.1-201ENST00000487626 519 ntBASIC16.21■□□□□ 0.19
COL8A2P25067 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.21■□□□□ 0.19
COL8A2P25067 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
COL8A2P25067 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL8A2P25067 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.21■□□□□ 0.19
COL8A2P25067 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COL8A2P25067 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms