Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCND1P24385 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCND1P24385 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCND1P24385 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCND1P24385 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCND1P24385 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCND1P24385 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CCND1P24385 AC098934.4-201ENST00000564127 592 ntBASIC19.32■□□□□ 0.68
CCND1P24385 AC060766.5-201ENST00000590539 871 ntBASIC19.32■□□□□ 0.68
CCND1P24385 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.32■□□□□ 0.68
CCND1P24385 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.32■□□□□ 0.68
CCND1P24385 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.32■□□□□ 0.68
CCND1P24385 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCND1P24385 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.32■□□□□ 0.68
CCND1P24385 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.32■□□□□ 0.68
CCND1P24385 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 AL691432.2-201ENST00000607222 2038 ntBASIC19.32■□□□□ 0.68
CCND1P24385 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCND1P24385 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CCND1P24385 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.31■□□□□ 0.68
CCND1P24385 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.31■□□□□ 0.68
CCND1P24385 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.31■□□□□ 0.68
CCND1P24385 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.31■□□□□ 0.68
CCND1P24385 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.31■□□□□ 0.68
CCND1P24385 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 AC083880.1-201ENST00000608266 535 ntBASIC19.31■□□□□ 0.68
CCND1P24385 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.31■□□□□ 0.68
CCND1P24385 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCND1P24385 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCND1P24385 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCND1P24385 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCND1P24385 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCND1P24385 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCND1P24385 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.3■□□□□ 0.68
CCND1P24385 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.3■□□□□ 0.68
CCND1P24385 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.3■□□□□ 0.68
CCND1P24385 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.3■□□□□ 0.68
CCND1P24385 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.3■□□□□ 0.68
CCND1P24385 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.3■□□□□ 0.68
CCND1P24385 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.3■□□□□ 0.68
CCND1P24385 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCND1P24385 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.3■□□□□ 0.68
CCND1P24385 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.3■□□□□ 0.68
CCND1P24385 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCND1P24385 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CCND1P24385 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCND1P24385 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCND1P24385 AC092368.3-202ENST00000574180 1591 ntBASIC19.3■□□□□ 0.68
CCND1P24385 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCND1P24385 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCND1P24385 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCND1P24385 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.29■□□□□ 0.68
CCND1P24385 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.29■□□□□ 0.68
CCND1P24385 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.29■□□□□ 0.68
CCND1P24385 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.29■□□□□ 0.68
CCND1P24385 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCND1P24385 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.29■□□□□ 0.68
CCND1P24385 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCND1P24385 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.29■□□□□ 0.68
CCND1P24385 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.29■□□□□ 0.68
CCND1P24385 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.29■□□□□ 0.68
CCND1P24385 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCND1P24385 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms