Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSR1P21757 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.99■□□□□ 0.31
MSR1P21757 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSR1P21757 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.99■□□□□ 0.31
MSR1P21757 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MSR1P21757 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.99■□□□□ 0.31
MSR1P21757 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MSR1P21757 AC141586.3-201ENST00000562166 1838 ntBASIC16.99■□□□□ 0.31
MSR1P21757 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSR1P21757 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.99■□□□□ 0.31
MSR1P21757 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.99■□□□□ 0.31
MSR1P21757 AC128676.1-201ENST00000454392 318 ntBASIC16.99■□□□□ 0.31
MSR1P21757 AC133681.1-201ENST00000465482 601 ntBASIC16.99■□□□□ 0.31
MSR1P21757 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.99■□□□□ 0.31
MSR1P21757 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.99■□□□□ 0.31
MSR1P21757 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
MSR1P21757 AC124016.1-201ENST00000609552 612 ntBASIC16.99■□□□□ 0.31
MSR1P21757 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
MSR1P21757 TEX21P-204ENST00000641479 1693 ntBASIC16.99■□□□□ 0.31
MSR1P21757 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MSR1P21757 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.99■□□□□ 0.31
MSR1P21757 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MSR1P21757 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MSR1P21757 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MSR1P21757 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MSR1P21757 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
MSR1P21757 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.98■□□□□ 0.31
MSR1P21757 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.98■□□□□ 0.31
MSR1P21757 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
MSR1P21757 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.98■□□□□ 0.31
MSR1P21757 KRT16P5-201ENST00000455284 522 ntBASIC16.98■□□□□ 0.31
MSR1P21757 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.98■□□□□ 0.31
MSR1P21757 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.98■□□□□ 0.31
MSR1P21757 AC110285.5-201ENST00000611501 352 ntBASIC16.98■□□□□ 0.31
MSR1P21757 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.98■□□□□ 0.31
MSR1P21757 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.98■□□□□ 0.31
MSR1P21757 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MSR1P21757 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.98■□□□□ 0.31
MSR1P21757 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MSR1P21757 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
MSR1P21757 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MSR1P21757 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MSR1P21757 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.97■□□□□ 0.31
MSR1P21757 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.97■□□□□ 0.31
MSR1P21757 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.97■□□□□ 0.31
MSR1P21757 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.97■□□□□ 0.31
MSR1P21757 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.97■□□□□ 0.31
MSR1P21757 LINC01465-201ENST00000408887 1940 ntBASIC16.97■□□□□ 0.31
MSR1P21757 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.97■□□□□ 0.31
MSR1P21757 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MSR1P21757 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MSR1P21757 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MSR1P21757 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MSR1P21757 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.97■□□□□ 0.31
MSR1P21757 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MSR1P21757 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSR1P21757 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.96■□□□□ 0.31
MSR1P21757 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.96■□□□□ 0.31
MSR1P21757 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSR1P21757 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSR1P21757 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
MSR1P21757 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MSR1P21757 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.96■□□□□ 0.31
MSR1P21757 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.96■□□□□ 0.31
MSR1P21757 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.96■□□□□ 0.31
MSR1P21757 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSR1P21757 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MSR1P21757 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MSR1P21757 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms