Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NELFEP18615 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NELFEP18615 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.98■□□□□ 0.63
NELFEP18615 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
NELFEP18615 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NELFEP18615 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NELFEP18615 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NELFEP18615 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.98■□□□□ 0.63
NELFEP18615 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NELFEP18615 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.98■□□□□ 0.63
NELFEP18615 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.98■□□□□ 0.63
NELFEP18615 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.98■□□□□ 0.63
NELFEP18615 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.98■□□□□ 0.63
NELFEP18615 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NELFEP18615 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.98■□□□□ 0.63
NELFEP18615 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NELFEP18615 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NELFEP18615 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NELFEP18615 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.98■□□□□ 0.63
NELFEP18615 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
NELFEP18615 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NELFEP18615 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NELFEP18615 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NELFEP18615 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
NELFEP18615 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NELFEP18615 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NELFEP18615 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NELFEP18615 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NELFEP18615 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.97■□□□□ 0.63
NELFEP18615 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NELFEP18615 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NELFEP18615 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NELFEP18615 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NELFEP18615 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NELFEP18615 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NELFEP18615 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NELFEP18615 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NELFEP18615 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NELFEP18615 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NELFEP18615 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NELFEP18615 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
NELFEP18615 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NELFEP18615 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NELFEP18615 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NELFEP18615 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.96■□□□□ 0.63
NELFEP18615 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NELFEP18615 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NELFEP18615 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.96■□□□□ 0.63
NELFEP18615 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NELFEP18615 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.96■□□□□ 0.63
NELFEP18615 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NELFEP18615 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.95■□□□□ 0.62
NELFEP18615 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.95■□□□□ 0.62
NELFEP18615 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NELFEP18615 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.95■□□□□ 0.62
NELFEP18615 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.95■□□□□ 0.62
NELFEP18615 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.95■□□□□ 0.62
NELFEP18615 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.95■□□□□ 0.62
NELFEP18615 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.95■□□□□ 0.62
NELFEP18615 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NELFEP18615 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.95■□□□□ 0.62
NELFEP18615 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
NELFEP18615 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NELFEP18615 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NELFEP18615 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.95■□□□□ 0.62
NELFEP18615 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
NELFEP18615 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NELFEP18615 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NELFEP18615 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NELFEP18615 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NELFEP18615 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NELFEP18615 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NELFEP18615 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.94■□□□□ 0.62
NELFEP18615 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.94■□□□□ 0.62
NELFEP18615 AC116351.2-201ENST00000606540 1585 ntBASIC18.94■□□□□ 0.62
NELFEP18615 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NELFEP18615 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.94■□□□□ 0.62
NELFEP18615 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NELFEP18615 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.94■□□□□ 0.62
NELFEP18615 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.94■□□□□ 0.62
NELFEP18615 BX088651.1-201ENST00000540551 451 ntBASIC18.94■□□□□ 0.62
NELFEP18615 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.94■□□□□ 0.62
NELFEP18615 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NELFEP18615 CD177P1-201ENST00000606252 935 ntBASIC18.94■□□□□ 0.62
NELFEP18615 AC073195.1-201ENST00000607241 877 ntBASIC18.94■□□□□ 0.62
NELFEP18615 AL353708.3-201ENST00000610272 989 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms