Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
CTPS1P17812 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTPS1P17812 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.35■□□□□ 0.69
CTPS1P17812 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTPS1P17812 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CTPS1P17812 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTPS1P17812 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CTPS1P17812 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CTPS1P17812 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CTPS1P17812 KRT17P2-201ENST00000300992 1314 ntBASIC19.34■□□□□ 0.69
CTPS1P17812 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.34■□□□□ 0.69
CTPS1P17812 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CTPS1P17812 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.34■□□□□ 0.69
CTPS1P17812 MESTP1-201ENST00000404287 994 ntBASIC19.34■□□□□ 0.69
CTPS1P17812 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.34■□□□□ 0.69
CTPS1P17812 AC008040.2-201ENST00000461049 708 ntBASIC19.34■□□□□ 0.69
CTPS1P17812 B3GAT3P1-201ENST00000471720 806 ntBASIC19.34■□□□□ 0.69
CTPS1P17812 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.34■□□□□ 0.69
CTPS1P17812 AL355075.4-201ENST00000554988 638 ntBASIC19.34■□□□□ 0.69
CTPS1P17812 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.34■□□□□ 0.69
CTPS1P17812 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.34■□□□□ 0.69
CTPS1P17812 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.34■□□□□ 0.69
CTPS1P17812 AC011298.2-201ENST00000617989 482 ntBASIC19.34■□□□□ 0.69
CTPS1P17812 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.34■□□□□ 0.69
CTPS1P17812 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.34■□□□□ 0.69
CTPS1P17812 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.34■□□□□ 0.69
CTPS1P17812 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
CTPS1P17812 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTPS1P17812 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.33■□□□□ 0.69
CTPS1P17812 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.33■□□□□ 0.69
CTPS1P17812 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTPS1P17812 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTPS1P17812 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTPS1P17812 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTPS1P17812 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTPS1P17812 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CTPS1P17812 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.33■□□□□ 0.68
CTPS1P17812 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.33■□□□□ 0.68
CTPS1P17812 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.33■□□□□ 0.68
CTPS1P17812 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.33■□□□□ 0.68
CTPS1P17812 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.33■□□□□ 0.68
CTPS1P17812 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CTPS1P17812 AC026271.3-201ENST00000571884 352 ntBASIC19.33■□□□□ 0.68
CTPS1P17812 KRT8P41-201ENST00000533985 1514 ntBASIC19.33■□□□□ 0.68
CTPS1P17812 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.33■□□□□ 0.68
CTPS1P17812 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.33■□□□□ 0.68
CTPS1P17812 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTPS1P17812 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CTPS1P17812 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.33■□□□□ 0.68
CTPS1P17812 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.33■□□□□ 0.68
CTPS1P17812 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTPS1P17812 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.33■□□□□ 0.68
CTPS1P17812 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS1P17812 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.32■□□□□ 0.68
CTPS1P17812 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS1P17812 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CTPS1P17812 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.32■□□□□ 0.68
CTPS1P17812 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.32■□□□□ 0.68
CTPS1P17812 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.32■□□□□ 0.68
CTPS1P17812 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS1P17812 AC004951.3-201ENST00000418645 1148 ntBASIC19.32■□□□□ 0.68
CTPS1P17812 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.32■□□□□ 0.68
CTPS1P17812 AC091390.4-202ENST00000476426 537 ntBASIC19.32■□□□□ 0.68
CTPS1P17812 AC116562.2-201ENST00000507042 360 ntBASIC19.32■□□□□ 0.68
CTPS1P17812 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.32■□□□□ 0.68
CTPS1P17812 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.32■□□□□ 0.68
CTPS1P17812 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.32■□□□□ 0.68
CTPS1P17812 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.32■□□□□ 0.68
CTPS1P17812 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.32■□□□□ 0.68
CTPS1P17812 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS1P17812 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS1P17812 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.32■□□□□ 0.68
CTPS1P17812 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.32■□□□□ 0.68
CTPS1P17812 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS1P17812 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.32■□□□□ 0.68
CTPS1P17812 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.32■□□□□ 0.68
CTPS1P17812 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS1P17812 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTPS1P17812 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTPS1P17812 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS1P17812 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.31■□□□□ 0.68
CTPS1P17812 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CTPS1P17812 FSCN1P1-201ENST00000568912 1481 ntBASIC19.31■□□□□ 0.68
CTPS1P17812 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS1P17812 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.31■□□□□ 0.68
CTPS1P17812 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS1P17812 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS1P17812 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.31■□□□□ 0.68
CTPS1P17812 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.31■□□□□ 0.68
CTPS1P17812 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTPS1P17812 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms