Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.74■□□□□ 0.75
BRAFP15056 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAFP15056 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAFP15056 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRAFP15056 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.74■□□□□ 0.75
BRAFP15056 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.74■□□□□ 0.75
BRAFP15056 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BRAFP15056 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAFP15056 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAFP15056 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAFP15056 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAFP15056 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BRAFP15056 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAFP15056 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAFP15056 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.74■□□□□ 0.75
BRAFP15056 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.73■□□□□ 0.75
BRAFP15056 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
BRAFP15056 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.73■□□□□ 0.75
BRAFP15056 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.73■□□□□ 0.75
BRAFP15056 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRAFP15056 AC138932.1-201ENST00000534164 6830 ntBASIC19.73■□□□□ 0.75
BRAFP15056 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.73■□□□□ 0.75
BRAFP15056 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRAFP15056 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.73■□□□□ 0.75
BRAFP15056 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.73■□□□□ 0.75
BRAFP15056 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRAFP15056 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.73■□□□□ 0.75
BRAFP15056 UNC93B4-201ENST00000505679 747 ntBASIC19.73■□□□□ 0.75
BRAFP15056 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.73■□□□□ 0.75
BRAFP15056 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.73■□□□□ 0.75
BRAFP15056 ITM2C-210ENST00000620962 501 ntBASIC19.73■□□□□ 0.75
BRAFP15056 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.73■□□□□ 0.75
BRAFP15056 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 AC009113.1-201ENST00000570267 2443 ntBASIC19.73■□□□□ 0.75
BRAFP15056 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
BRAFP15056 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRAFP15056 AL161938.1-201ENST00000569833 2180 ntBASIC19.73■□□□□ 0.75
BRAFP15056 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.73■□□□□ 0.75
BRAFP15056 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
BRAFP15056 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.72■□□□□ 0.75
BRAFP15056 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
BRAFP15056 AC005332.8-201ENST00000622750 2735 ntBASIC19.72■□□□□ 0.75
BRAFP15056 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.72■□□□□ 0.75
BRAFP15056 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
BRAFP15056 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.72■□□□□ 0.75
BRAFP15056 AL031963.3-201ENST00000606441 850 ntBASIC19.72■□□□□ 0.75
BRAFP15056 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
BRAFP15056 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
BRAFP15056 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
BRAFP15056 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.72■□□□□ 0.75
BRAFP15056 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRAFP15056 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRAFP15056 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRAFP15056 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRAFP15056 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRAFP15056 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
BRAFP15056 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRAFP15056 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRAFP15056 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRAFP15056 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.71■□□□□ 0.75
BRAFP15056 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
BRAFP15056 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.71■□□□□ 0.75
BRAFP15056 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.71■□□□□ 0.75
BRAFP15056 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRAFP15056 SOX15-203ENST00000570788 1093 ntBASIC19.71■□□□□ 0.75
BRAFP15056 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BRAFP15056 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.71■□□□□ 0.75
BRAFP15056 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
BRAFP15056 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms