Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.26■□□□□ 0.83
KRT3P12035 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KRT3P12035 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KRT3P12035 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KRT3P12035 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 BX323043.1-201ENST00000641006 1765 ntBASIC20.26■□□□□ 0.83
KRT3P12035 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KRT3P12035 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT3P12035 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT3P12035 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT3P12035 AC120498.9-201ENST00000339021 3867 ntBASIC20.25■□□□□ 0.83
KRT3P12035 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
KRT3P12035 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
KRT3P12035 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT3P12035 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KRT3P12035 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT3P12035 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT3P12035 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT3P12035 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.25■□□□□ 0.83
KRT3P12035 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT3P12035 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT3P12035 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT3P12035 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT3P12035 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KRT3P12035 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT3P12035 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT3P12035 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT3P12035 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT3P12035 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT3P12035 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT3P12035 RNF165-205ENST00000588679 2904 ntBASIC20.24■□□□□ 0.83
KRT3P12035 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT3P12035 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT3P12035 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KRT3P12035 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
KRT3P12035 AC098818.2-201ENST00000564925 2320 ntBASIC20.24■□□□□ 0.83
KRT3P12035 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KRT3P12035 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT3P12035 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT3P12035 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT3P12035 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.24■□□□□ 0.83
KRT3P12035 AL160286.2-201ENST00000567150 934 ntBASIC20.24■□□□□ 0.83
KRT3P12035 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KRT3P12035 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.24■□□□□ 0.83
KRT3P12035 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KRT3P12035 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT3P12035 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KRT3P12035 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT3P12035 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT3P12035 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT3P12035 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT3P12035 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT3P12035 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT3P12035 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
KRT3P12035 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT3P12035 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KRT3P12035 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT3P12035 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT3P12035 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KRT3P12035 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT3P12035 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KRT3P12035 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT3P12035 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KRT3P12035 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT3P12035 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.23■□□□□ 0.83
KRT3P12035 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.23■□□□□ 0.83
KRT3P12035 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT3P12035 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KRT3P12035 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KRT3P12035 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT3P12035 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT3P12035 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT3P12035 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT3P12035 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT3P12035 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT3P12035 AL359736.2-201ENST00000621992 437 ntBASIC20.22■□□□□ 0.83
KRT3P12035 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT3P12035 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT3P12035 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT3P12035 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT3P12035 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT3P12035 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
KRT3P12035 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
KRT3P12035 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT3P12035 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
KRT3P12035 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
KRT3P12035 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
KRT3P12035 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT3P12035 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KRT3P12035 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms