Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD48P09326 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
CD48P09326 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.94■□□□□ 0.78
CD48P09326 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CD48P09326 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.94■□□□□ 0.78
CD48P09326 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD48P09326 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.94■□□□□ 0.78
CD48P09326 KRT16P5-201ENST00000455284 522 ntBASIC19.94■□□□□ 0.78
CD48P09326 AC133681.1-201ENST00000465482 601 ntBASIC19.94■□□□□ 0.78
CD48P09326 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD48P09326 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CD48P09326 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.94■□□□□ 0.78
CD48P09326 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD48P09326 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.94■□□□□ 0.78
CD48P09326 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CD48P09326 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD48P09326 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CD48P09326 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CD48P09326 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.94■□□□□ 0.78
CD48P09326 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.94■□□□□ 0.78
CD48P09326 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD48P09326 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD48P09326 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD48P09326 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CD48P09326 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.93■□□□□ 0.78
CD48P09326 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.93■□□□□ 0.78
CD48P09326 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD48P09326 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD48P09326 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD48P09326 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD48P09326 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD48P09326 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.93■□□□□ 0.78
CD48P09326 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD48P09326 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CD48P09326 C1QBPP2-201ENST00000528754 825 ntBASIC19.93■□□□□ 0.78
CD48P09326 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CD48P09326 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CD48P09326 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CD48P09326 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CD48P09326 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.92■□□□□ 0.78
CD48P09326 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.92■□□□□ 0.78
CD48P09326 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 AC006333.2-201ENST00000607957 2099 ntBASIC19.92■□□□□ 0.78
CD48P09326 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CD48P09326 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CD48P09326 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.92■□□□□ 0.78
CD48P09326 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.92■□□□□ 0.78
CD48P09326 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.92■□□□□ 0.78
CD48P09326 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.92■□□□□ 0.78
CD48P09326 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.92■□□□□ 0.78
CD48P09326 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.92■□□□□ 0.78
CD48P09326 AC110285.5-201ENST00000611501 352 ntBASIC19.92■□□□□ 0.78
CD48P09326 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.92■□□□□ 0.78
CD48P09326 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CD48P09326 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CD48P09326 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CD48P09326 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.92■□□□□ 0.78
CD48P09326 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
CD48P09326 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.92■□□□□ 0.78
CD48P09326 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.92■□□□□ 0.78
CD48P09326 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD48P09326 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD48P09326 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD48P09326 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.91■□□□□ 0.78
CD48P09326 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.91■□□□□ 0.78
CD48P09326 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD48P09326 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD48P09326 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD48P09326 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.91■□□□□ 0.78
CD48P09326 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD48P09326 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD48P09326 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CD48P09326 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.91■□□□□ 0.78
CD48P09326 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.91■□□□□ 0.78
CD48P09326 AL160286.2-201ENST00000567150 934 ntBASIC19.91■□□□□ 0.78
CD48P09326 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.91■□□□□ 0.78
CD48P09326 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CD48P09326 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CD48P09326 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD48P09326 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CD48P09326 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD48P09326 AC120498.9-201ENST00000339021 3867 ntBASIC19.9■□□□□ 0.78
CD48P09326 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD48P09326 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD48P09326 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CD48P09326 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD48P09326 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CD48P09326 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms