Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.63■□□□□ 0.89
CSPG5O95196 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.63■□□□□ 0.89
CSPG5O95196 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
CSPG5O95196 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CSPG5O95196 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CSPG5O95196 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.63■□□□□ 0.89
CSPG5O95196 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.63■□□□□ 0.89
CSPG5O95196 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.63■□□□□ 0.89
CSPG5O95196 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CSPG5O95196 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG5O95196 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.62■□□□□ 0.89
CSPG5O95196 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.62■□□□□ 0.89
CSPG5O95196 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 AL157384.1-201ENST00000445995 2473 ntBASIC20.62■□□□□ 0.89
CSPG5O95196 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CSPG5O95196 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CSPG5O95196 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.62■□□□□ 0.89
CSPG5O95196 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CSPG5O95196 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.62■□□□□ 0.89
CSPG5O95196 AL160286.2-201ENST00000567150 934 ntBASIC20.62■□□□□ 0.89
CSPG5O95196 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.62■□□□□ 0.89
CSPG5O95196 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.62■□□□□ 0.89
CSPG5O95196 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CSPG5O95196 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.62■□□□□ 0.89
CSPG5O95196 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CSPG5O95196 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG5O95196 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CSPG5O95196 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CSPG5O95196 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CSPG5O95196 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.61■□□□□ 0.89
CSPG5O95196 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 AC112907.2-201ENST00000448639 330 ntBASIC20.61■□□□□ 0.89
CSPG5O95196 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.61■□□□□ 0.89
CSPG5O95196 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.61■□□□□ 0.89
CSPG5O95196 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.61■□□□□ 0.89
CSPG5O95196 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CSPG5O95196 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG5O95196 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CSPG5O95196 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CSPG5O95196 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CSPG5O95196 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CSPG5O95196 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.6■□□□□ 0.89
CSPG5O95196 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.6■□□□□ 0.89
CSPG5O95196 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.6■□□□□ 0.89
CSPG5O95196 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CSPG5O95196 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 AC092667.1-201ENST00000434301 2586 ntBASIC20.6■□□□□ 0.89
CSPG5O95196 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG5O95196 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
CSPG5O95196 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CSPG5O95196 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.59■□□□□ 0.89
CSPG5O95196 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CSPG5O95196 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG5O95196 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms