Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
LTN1O94822 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC25.55■■□□□ 1.68
LTN1O94822 NDUFV2-AS1-203ENST00000608008 779 ntBASIC25.55■■□□□ 1.68
LTN1O94822 SDHAP1-207ENST00000440850 2000 ntBASIC25.55■■□□□ 1.68
LTN1O94822 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LTN1O94822 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
LTN1O94822 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC25.55■■□□□ 1.68
LTN1O94822 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 RASA4DP-201ENST00000460726 1199 ntBASIC25.54■■□□□ 1.68
LTN1O94822 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC25.54■■□□□ 1.68
LTN1O94822 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC25.54■■□□□ 1.68
LTN1O94822 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC25.54■■□□□ 1.68
LTN1O94822 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC25.54■■□□□ 1.68
LTN1O94822 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LTN1O94822 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
LTN1O94822 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
LTN1O94822 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LTN1O94822 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LTN1O94822 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC25.53■■□□□ 1.68
LTN1O94822 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
LTN1O94822 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
LTN1O94822 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
LTN1O94822 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
LTN1O94822 SEC1P-202ENST00000473944 940 ntBASIC25.53■■□□□ 1.68
LTN1O94822 AC140113.3-201ENST00000605663 199 ntBASIC25.53■■□□□ 1.68
LTN1O94822 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC25.53■■□□□ 1.68
LTN1O94822 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LTN1O94822 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LTN1O94822 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
LTN1O94822 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.52■■□□□ 1.68
LTN1O94822 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
LTN1O94822 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LTN1O94822 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LTN1O94822 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LTN1O94822 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
LTN1O94822 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC25.52■■□□□ 1.68
LTN1O94822 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC25.52■■□□□ 1.68
LTN1O94822 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
LTN1O94822 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LTN1O94822 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
LTN1O94822 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC25.52■■□□□ 1.68
LTN1O94822 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
LTN1O94822 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
LTN1O94822 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
LTN1O94822 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC25.51■■□□□ 1.67
LTN1O94822 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
LTN1O94822 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.51■■□□□ 1.67
LTN1O94822 FGF14-AS2-201ENST00000606448 1074 ntBASIC25.51■■□□□ 1.67
LTN1O94822 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.51■■□□□ 1.67
LTN1O94822 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 PP7080-204ENST00000510714 601 ntTSL 3 BASIC25.51■■□□□ 1.67
LTN1O94822 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC25.51■■□□□ 1.67
LTN1O94822 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC25.51■■□□□ 1.67
LTN1O94822 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LTN1O94822 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
LTN1O94822 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
LTN1O94822 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
LTN1O94822 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
LTN1O94822 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
LTN1O94822 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
LTN1O94822 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
LTN1O94822 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC25.5■■□□□ 1.67
LTN1O94822 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC25.5■■□□□ 1.67
LTN1O94822 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
LTN1O94822 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
LTN1O94822 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC25.5■■□□□ 1.67
LTN1O94822 AC092597.1-201ENST00000487352 616 ntBASIC25.5■■□□□ 1.67
LTN1O94822 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC25.5■■□□□ 1.67
LTN1O94822 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
LTN1O94822 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC25.5■■□□□ 1.67
LTN1O94822 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
LTN1O94822 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC25.5■■□□□ 1.67
LTN1O94822 AC093525.10-201ENST00000625130 1569 ntBASIC25.5■■□□□ 1.67
LTN1O94822 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC25.49■■□□□ 1.67
LTN1O94822 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
LTN1O94822 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
LTN1O94822 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC25.49■■□□□ 1.67
LTN1O94822 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.49■■□□□ 1.67
LTN1O94822 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC25.49■■□□□ 1.67
LTN1O94822 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms