Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.44■□□□□ 0.7
USP1O94782 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
USP1O94782 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.44■□□□□ 0.7
USP1O94782 TUBB8P6-201ENST00000436895 1288 ntBASIC19.44■□□□□ 0.7
USP1O94782 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.44■□□□□ 0.7
USP1O94782 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.44■□□□□ 0.7
USP1O94782 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
USP1O94782 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP1O94782 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP1O94782 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.44■□□□□ 0.7
USP1O94782 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.44■□□□□ 0.7
USP1O94782 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
USP1O94782 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.43■□□□□ 0.7
USP1O94782 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.43■□□□□ 0.7
USP1O94782 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
USP1O94782 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.43■□□□□ 0.7
USP1O94782 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USP1O94782 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
USP1O94782 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.43■□□□□ 0.7
USP1O94782 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.43■□□□□ 0.7
USP1O94782 UNC93B4-201ENST00000505679 747 ntBASIC19.43■□□□□ 0.7
USP1O94782 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.43■□□□□ 0.7
USP1O94782 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.43■□□□□ 0.7
USP1O94782 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.43■□□□□ 0.7
USP1O94782 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.43■□□□□ 0.7
USP1O94782 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
USP1O94782 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP1O94782 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.43■□□□□ 0.7
USP1O94782 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP1O94782 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP1O94782 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
USP1O94782 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.42■□□□□ 0.7
USP1O94782 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
USP1O94782 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP1O94782 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP1O94782 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
USP1O94782 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
USP1O94782 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.42■□□□□ 0.7
USP1O94782 KRT18P6-201ENST00000555540 1265 ntBASIC19.42■□□□□ 0.7
USP1O94782 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.42■□□□□ 0.7
USP1O94782 AL049812.1-201ENST00000432563 2267 ntBASIC19.42■□□□□ 0.7
USP1O94782 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
USP1O94782 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP1O94782 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.42■□□□□ 0.7
USP1O94782 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.42■□□□□ 0.7
USP1O94782 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
USP1O94782 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 AC007613.1-201ENST00000572811 2597 ntBASIC19.41■□□□□ 0.7
USP1O94782 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.41■□□□□ 0.7
USP1O94782 AC005082.1-201ENST00000413042 2259 ntBASIC19.41■□□□□ 0.7
USP1O94782 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.41■□□□□ 0.7
USP1O94782 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
USP1O94782 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
USP1O94782 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
USP1O94782 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.41■□□□□ 0.7
USP1O94782 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.41■□□□□ 0.7
USP1O94782 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
USP1O94782 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
USP1O94782 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.41■□□□□ 0.7
USP1O94782 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.41■□□□□ 0.7
USP1O94782 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP1O94782 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms