Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.43■□□□□ 0.38
CLPXO76031 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 FP475955.4-201ENST00000623131 1990 ntBASIC17.43■□□□□ 0.38
CLPXO76031 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 AC004911.1-201ENST00000416316 871 ntBASIC17.43■□□□□ 0.38
CLPXO76031 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 NTF6G-201ENST00000591094 616 ntBASIC17.43■□□□□ 0.38
CLPXO76031 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.43■□□□□ 0.38
CLPXO76031 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.43■□□□□ 0.38
CLPXO76031 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLPXO76031 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 SIRPAP1-201ENST00000448467 1770 ntBASIC17.43■□□□□ 0.38
CLPXO76031 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CLPXO76031 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.43■□□□□ 0.38
CLPXO76031 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLPXO76031 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
CLPXO76031 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.42■□□□□ 0.38
CLPXO76031 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.42■□□□□ 0.38
CLPXO76031 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 KRT8P36-201ENST00000489121 1440 ntBASIC17.42■□□□□ 0.38
CLPXO76031 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLPXO76031 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.42■□□□□ 0.38
CLPXO76031 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.42■□□□□ 0.38
CLPXO76031 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 KRT87P-202ENST00000534226 1464 ntBASIC17.42■□□□□ 0.38
CLPXO76031 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPXO76031 HTR7P1-202ENST00000624664 4411 ntBASIC17.41■□□□□ 0.38
CLPXO76031 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPXO76031 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPXO76031 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLPXO76031 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
CLPXO76031 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPXO76031 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPXO76031 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPXO76031 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPXO76031 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPXO76031 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPXO76031 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLPXO76031 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLPXO76031 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPXO76031 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 AC061975.6-201ENST00000579045 1553 ntBASIC17.4■□□□□ 0.38
CLPXO76031 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CLPXO76031 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLPXO76031 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPXO76031 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms